Managing Your Obsidian Vault with Claude AI
Learn how to manage files in your Obsidian vault with Claude AI

Supercharge Your Obsidian Vault with Claude AI
Obsidian has become one of the most powerful knowledge management tools for interconnected note-taking. What if you could combine the intelligence of Claude AI with your personal knowledge base? MCP JARVIS makes this possible by giving Claude direct access to your Obsidian vault.
Why Connect Claude to Your Obsidian Vault?
Connecting Claude to your Obsidian vault creates powerful possibilities:
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Intelligence amplification - Claude can search, analyze, and synthesize information across your entire knowledge base
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Enhanced note creation - Generate well-structured notes with proper links and formatting
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Knowledge gap identification - Claude can spot connections between notes that you might miss
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Efficient knowledge retrieval - Ask questions about your notes and get immediate, contextual answers
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Content transformation - Convert rough notes into polished content or extract key insights
Setting Up Obsidian Access for Claude
The process is surprisingly simple, requiring just a quick configuration change to your MCP JARVIS setup:
Step 1: Find Your Obsidian Vault Location
First, you need to know where your Obsidian vault is stored on your computer:
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Open Obsidian
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Go to Settings (gear icon) > “About”
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Look for “Vault location” and note the full path
Alternatively, you can right-click on any note in Obsidian and select “Show in system explorer” (Windows) or “Show in Finder” (Mac) to locate your vault.
Step 2: Add Your Vault to Allowed Directories
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In Claude for Desktop, go to Settings > Developer tab > Edit config
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Find the “file_system” section in the configuration
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Add your Obsidian vault path to the “allowed_dirs” array
Here’s how it should look (replace the example path with your actual vault path):
"file_system": {
"allowed_dirs": [
"/Users/yourname/Documents/ObsidianVault",
... other directories ...
]
}
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Save the configuration file
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Restart Claude for Desktop completely (quit the application and start it again)
Working with Your Obsidian Vault
Once configured, Claude can now interact with your Obsidian vault in multiple ways:
Browsing Your Knowledge Base
Ask Claude to explore your vault structure:
Please list all the files in my Obsidian vault and identify the main topic areas based on folder structure.
Creating New Notes
Claude can help you create well-structured new notes with proper frontmatter, links, and formatting:
Create a new note about "Spaced Repetition Learning Techniques" in my Obsidian vault. Include frontmatter with tags, links to related notes if you can find them, and a well-structured outline with key concepts.
Analyzing Existing Notes
Claude can read and analyze your existing notes:
Please read my note on 'Project Management Frameworks' and summarize the key methodologies I've documented.
Finding and Filling Knowledge Gaps
Claude can identify areas where your knowledge base could be expanded:
Review my notes on artificial intelligence and suggest 3-5 subtopics that seem to be missing or underdeveloped.
Content Transformation
Transform rough notes into more polished content:
Please read my meeting notes from yesterday and convert them into an actionable project plan with clear next steps and responsibilities.
Example Workflow: Literature Note Creation
Here’s a practical example of using Claude with your Obsidian vault for knowledge management:
- Ask Claude to search for existing notes on a topic:
Find all my notes related to "climate change solutions" in my Obsidian vault.
- Request Claude to create a literature note from a book or article:
I just read "Drawdown" by Paul Hawken. Can you create a literature note for my Obsidian vault summarizing the key climate solutions discussed, linking to my existing notes on climate change?
- Ask Claude to suggest connections:
Based on this new note and my existing ones, what connections or themes do you notice that I might want to explore further?
Technical Details and Best Practices
Organizing for AI Access
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Consistent naming conventions make it easier for Claude to find relevant files
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README files in folders help Claude understand your organization system
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Tags and frontmatter provide additional context for Claude to understand note relationships
Security Considerations
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Claude can only access the specific directories you allow
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Consider creating a separate vault for Claude access if you have sensitive information
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Remember that while Claude respects privacy, you should never store passwords or highly sensitive information in notes accessible to any AI
Performance Tips
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Large vaults with thousands of notes may take Claude slightly longer to process
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Start with specific requests rather than asking Claude to analyze your entire vault at once
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Create an index note that maps out the structure of your vault to help Claude navigate more efficiently
Beyond Basic Integration
Once you’re comfortable with the basic integration, you can explore more advanced workflows:
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Automated daily notes - Have Claude prepare a daily note template based on your calendar and previous notes
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Research assistance - Ask Claude to collect and synthesize information from across your vault on a specific topic
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Content creation pipelines - Use Claude to transform notes into blog posts, presentations, or other content formats
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Knowledge review - Have Claude periodically summarize key areas of your knowledge base to reinforce learning
Conclusion
By connecting Claude to your Obsidian vault through MCP JARVIS, you’re creating a powerful knowledge management system where your personal notes become an extension of Claude’s capabilities. This integration bridges the gap between your accumulated knowledge and the analytical and creative capabilities of AI.
Start with simple workflows and gradually expand as you become more comfortable with the possibilities. Your personal knowledge base will become increasingly valuable as Claude helps you connect dots, fill gaps, and transform raw notes into actionable insights.
Have you created an interesting workflow combining Claude and Obsidian? Share your experience in our community or reach out with questions about optimizing your setup.